Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917825.1_cds_XP_016467380.1_60133
CDS Infomation

[gene=LOC107790007] [db_xref=GeneID:107790007] [protein=homeobox-leucine zipper protein HDG2-like] [protein_id=XP_016467380.1] [location=join(152082..152174,153456..153679,153842..153959,154277..154471,154571..154984,155397..155498,155628..155828,156036..156216,156324..156598,157465..157560,157764..158117)] [gbkey=CDS]
Sequence

ATGAATCCGGCAAACCAGTTTTCGTCGATGATCAGAAATGATGGGAATGATGGTGGATAT
GTTTCTTCATCTTCTGGACTCCCGCTTGGTCAGTCAGGTAATATAATGGAAAGTCAGATT
CATTCACTGGACATGGCGTCAAACACATCGGAAAGTGAACTAATGCCGCTGCTGATGGAG
GAGGAATTCGACAGCAAATCCGGTAGTCATGACAATAATGAAGAAGGCAAATCCAGTGAT
GAACAAGATGTTAATCAGCCTGAGAGGATAAAGCGCTATCACCGCCACACTCAGCATCAG
ATCCAAGAAATGGAAAATTTCTTTAAGAACTGTCCACACCCGGATGACAAGCAAAGGAAG
GAGCTCAGTCGTGAACTAGGGTTAGAGCCGCTGCAAGTGAAATTTTGGTTCCAAAATAAA
CGTACTCAAATGAAGAATCAAAATGATCGTTCCGAGCTCTCATCACTTCGAGATGAAAAT
GAAAAGCTTAGGACTGAACATGTGCAGCTCCGTGAAGCTCTCAACAATGCTACTTCTTGC
CCTATATGTGGCGGCCCACAAATTAGTTTAGGTGAAATGTCATTTGAAGAAAATCAATTG
AGGATCGAAAATGCTCGACTAAAAGAAGAGGTTGATCGAATTTCAGCTTTCGCAGCAAAA
TATGTGGGCAAGCCAGTTTCGAGCTTAAACGTTTACTCGCCTTCAGTAACTCCTCCTAGT
TCACTTGATCTTGGAAATGCATTTGGAAATAACAGAGAGGTTATAAGATCATCATTTAAC
GGACCAACAGAGGCCGAGAAGCCATTTATAATTGAACTAGCAGTTGCAGCAATGGAAGAG
TTTATTCAAATGGCTCAAATGGGAGAACCACTTTGGTTGCCTAGCGTTGATCGTCGAACA
AATTTTCTAAATGAAGAAGAGTATGTTAGATTGTTCCCTACAGGAATTGGACCTAAGATT
GCAGGGTTTAAGACTGAAGCTTCAAAAGATACTGCTGTTGTTTTCTTGAATCCTATCAAC
TTGGTTGAAATTCTTATGGACACGAATAAGTGGTCAAGTATGTTCTCAAGTATTGTGTCG
ACGGCTGTTACAATGGATGTGTTATCAACTGGAGTTGCGGGAAATTTCAACGGAGCATTG
CAAGTGATATTTGCAGAATTTCAAGTACCATTTCCACAGGTTCCAACTCGAGATTGCTAC
TTCGTAAGATATTGTAAACGAAGTGTTGATGGAATATGGGCAGTTGTCGACGTTTCCCTC
GACTATCTGCGTCCTATCCCGACTGCTAGTTGCCAGCGAAGGCCCTCAGGATGTCTAATT
CAAGCAATGCCAAATGGGTACTCAAAGGTCACCTGGATGGAGCATGTAGAGGCTGATGAT
ACAGCAATCTATAACATTTACAAGCCTCTTCTGAATTCTGGCCTTGCATTTGGGGCAAAG
CGTTGGATTGCTACTTTGGATAGGCAATGTGAACGGCTAGCAAGTGCAATGGCCACAAAT
TTACCCGACGATGACATGACTAATATGGTATTAGGAGGTCCAGAGGGAAGAAGGAGTGTG
TTGAAGCTAGCGGAGAGAATGGTAATTAGCTATTGTTCTGGAGTTAGTGCTACGGCAGCT
CATCAATGGACAACTCTCTCAGGAAGTGGTTCAGAAAATGATGTTCGAATCATGTTTAGG
AAAAGCATTAATGATCCAGGCAGACCTCCTGGCATTGTGATGTGCGCTGCTACTTCCTTC
TGGCTCCCGATTTCTGCGAAAACAGTGTTTGATTTTCTCCGTGATGTGAACACTAGGAGC
GAGTGGGATATACTATCCAATGGGAGTGTTATTCAGAGATTGGTTTATATTGCTAATGGC
AGGGAAACAGGCAGCTCTGTCTCCATATTGAGAGTGAATAGTAGTGCAATCTCAAGCCAA
AACAATATGTTGATATTGCAAGAGAGCAGCACAGATCCAACAGGGTCATTTGTTGTTTAT
GCACCTGTTGATGTTCCTGCTATGAACACAGTAATAAATGGCGGAGATCCGGAATACGTC
GCGCTTCTACCTTCTGGATTTGCTATACTACCAGATGGTCCTCCAGGCAGAATTGCTGGT
GGATCTCTCCTCACTATTGCATTTCAGATTTTTGTTGATTCTGTTCCTACCGCTAAGCTT
TCCCTTGGATCAGTTGCTACTGTCAACAAACTCATTGCTTGCACAGTTGATAAGATCAGG
GCTGCTCTTCTATCCGATACCCCTCGATGCTAA

Peptide Sequence

PEP ID

XP_016467380.1
PEP Infomation

PREDICTED: homeobox-leucine zipper protein HDG2-like [Nicotiana tabacum]
Sequence

MNPANQFSSMIRNDGNDGGYVSSSSGLPLGQSGNIMESQIHSLDMASNTSESELMPLLME
EEFDSKSGSHDNNEEGKSSDEQDVNQPERIKRYHRHTQHQIQEMENFFKNCPHPDDKQRK
ELSRELGLEPLQVKFWFQNKRTQMKNQNDRSELSSLRDENEKLRTEHVQLREALNNATSC
PICGGPQISLGEMSFEENQLRIENARLKEEVDRISAFAAKYVGKPVSSLNVYSPSVTPPS
SLDLGNAFGNNREVIRSSFNGPTEAEKPFIIELAVAAMEEFIQMAQMGEPLWLPSVDRRT
NFLNEEEYVRLFPTGIGPKIAGFKTEASKDTAVVFLNPINLVEILMDTNKWSSMFSSIVS
TAVTMDVLSTGVAGNFNGALQVIFAEFQVPFPQVPTRDCYFVRYCKRSVDGIWAVVDVSL
DYLRPIPTASCQRRPSGCLIQAMPNGYSKVTWMEHVEADDTAIYNIYKPLLNSGLAFGAK
RWIATLDRQCERLASAMATNLPDDDMTNMVLGGPEGRRSVLKLAERMVISYCSGVSATAA
HQWTTLSGSGSENDVRIMFRKSINDPGRPPGIVMCAATSFWLPISAKTVFDFLRDVNTRS
EWDILSNGSVIQRLVYIANGRETGSSVSILRVNSSAISSQNNMLILQESSTDPTGSFVVY
APVDVPAMNTVINGGDPEYVALLPSGFAILPDGPPGRIAGGSLLTIAFQIFVDSVPTAKL
SLGSVATVNKLIACTVDKIRAALLSDTPRC

Transcript Sequence

Gene sequence data has not been registered.